Here's alittle update from my end after unplugging for about 200 miles. The truck runs fine with the exception of the EB sometimes being really jerky and unpredictable, and there was alittle bit better mileage observed in the neighborhood of around 1mpg increase. Now comes the bad news....
I used to be a salesman at the dodge house and I became good friends with some of the techs. I just went down there today and asked him what unplugging the EGR would do. Now while he agrees that it will limit the soot on the intake, he also said that the EGR cooler will eventually backup and cause back pressure on the truck and can kill the engine. So as I quote exactly what I asked him "so your telling me that if I'm gonna mess with anything I just need to delete it all together?" His answer was "Yep"
With this being said, I've heard some people claiming that the EB was staying on while it was turned off and apparently in reality it wasn't the EB it was the cooler backing up and creating back pressure which is identical to what the EB does.
So, with 2000 miles on my truck I will plug my EGR back in and keep it plugged in until it either screws up under warranty or the warranty runs out and I just do the deletes.
Now that we have alittle more information on the topic of EGR I think we can make some educated statements.
1. The EGR unplug does in fact cause the EGR Valve to stay closed which will result in backing up the EGR cooler over time.
2. When the vehicle goes into regen with the EGR unplugged it can sometimes cause loss of power, this is acheived by the intake butterfly closing off cool fresh air to increase temps needed for regen, which means that the truck is being starved of air and has loss of power. This also means that some of the regens aren't completing correctly and could be causing the constant regens.